CDS
Accession Number | TCMCG066C37604 |
gbkey | CDS |
Protein Id | XP_034576618.1 |
Location | complement(join(47437042..47437245,47437347..47437526,47437913..47438053,47438132..47438418,47438508..47438697,47438781..47438887,47438977..47439233,47439311..47439504,47439602..47439720,47441286..47441592)) |
Gene | LOC117840250 |
GeneID | 117840250 |
Organism | Setaria viridis |
Protein
Length | 661aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA633601 |
db_source | XM_034720727.1 |
Definition | polyadenylate-binding protein 4-like [Setaria viridis] |
EGGNOG-MAPPER Annotation
COG_category | A |
Description | Binds the poly(A) tail of mRNA |
KEGG_TC | - |
KEGG_Module | - |
KEGG_Reaction | - |
KEGG_rclass | - |
BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
KEGG_ko |
ko:K13126
[VIEW IN KEGG] |
EC | - |
KEGG_Pathway |
ko03013
[VIEW IN KEGG] ko03015 [VIEW IN KEGG] ko03018 [VIEW IN KEGG] map03013 [VIEW IN KEGG] map03015 [VIEW IN KEGG] map03018 [VIEW IN KEGG] |
GOs | - |
Sequence
CDS: ATGCCAGCGTCGGAGATGGAAGCGGCTGCTGCGTCCGCGCACGCGCCGGCGGGGGCCGCTGATCAGCAGCAGGAGGCAGAATCGGCGCCCGCTCCCGCGGTGCAGCCGGGGAGTGAGGAGGCGCAGCCGGCTGCGGCGGCGGTGCCGGCGCTGTACGTGGGCGATCTGCACGAGGACGTGGGGGAGGATCACCTGTTCGACGCCTTCAGCAAGATCGGCACCGTCACGTCCGTGCGTGTCTGCCGCGACAACGCCACCAGCAGATCGCTTAGATATGGATACGTGAACTACTTCTCTCGGGCTGACGCTGTGACTGCTCTTGAAAAATTGAACCATAGCTTGGTTTTGGATAAGCCGATAAGGGTGATGTGGTCGAACCGGGATCCAGATGCCAGGAGAAGTGGTGTCGGTAACATATTTGTTAAGAACCTTAATGATTTTGTGGACAATGCCAGGCTTCAAGAATTGTTCTCTAAGTTTGGAGATGTTTTATCATGTAAAGTTGCCAAAAATGAAGATGGGACTACTAGAGGCTATGGGTTCGTTCAATTTGCCTCACAAGAATCAGCAGATGCAGCAATTGAGAACCTCCATGGCTCTCTTTTCAATGACAGGAAATTGCATGTTGCTACTTTTGTCAAGAAAAGTGAACGATCTGCAAATAATGATGATAAATTTACTAACCTATATATGAAGCATCTGGATGATGACATAACAGAGGAACTTGTAAAATTGAAGTTCTCTCAGTTTGGTCCGATAGTTAGTGTGAAAATTATGAGGAGACCTGATGGGTCATCTCTGGGATTTGGGTTTGTCAGCTTCCAAAACCCTGAAAGTGCCATTAAAGCACAAGAGACCATGCATGGGATGCCAATTGGATCAAAAGCTTTGTATGTGGCAAGAGCTCAAAAGAAGGAGGAAAGGAAACAATATTTGCAGCGCTTACATGAGGAGAAAAGAAATGAAATAATAAATAAGAGCAATGAATCAAATGTTTATATAAAAAACATTCATGATGAAGTCGATGATGAAGCTCTTCGCGCACGTTTTGATGAATTTGGTAACATCACATCTGCGAAGGTTATGCGTGATGATAAGGGCATTAGTAGAGGCTTCGGGTTTGTATGTTTTAGTACACCTGAGGAAGCAAAGGGTGCCGTAAGCAGCATGCGTGGTGTCATGTTTTATGGAAAACCATTATATGTTGCTATTTTTCAAAGGAAAGAGGAGAGGCGAGCCAAACTGCAGCAACACTTTGCTCAGCTTGCTACAATGGTTGGACCTGCAAACTCTATGATTCCCACTGGATATCCACATGTATACTTTGCCCATCCAAGTACACATCTCCCTCAAGGTCCTCCAAGACATGGATTTGTGTATCCACCCATGGGGCTCAGTCATGAATGGAGGCCAAATATGTTTCCTTCACCACCAAATATCCCACAAATACATTCACCCATGATGCCAAATTCGCCAAGGCATTATAGAAGCAACAGGGGAAGGATGGGTGGAAATATGATGCCTCTTCCCCATACCGTTCATGCTGTAAACTATGTCGCACATGCACCACCAGCTAAAGATTTCATGTCTATGCCCCGACAGAGATTCAGCCATCCAAAGTACTTCTCCAATGATGTTATGGCCAACGGTTTGGCCATTCATCACGGTGACCCTGTTTTGTCGGAGAATGATTCTTTCAGCACCTATCTGGCTTCTGCTCCACCCGGGGAACAGAAGAAGTTGCTCGGGAACAGGCTCTTTCCGCTCGTTGAGAGACACCAGCCTCGACTCGCTCGCAAAATCACCGGGATGCTGCTGGAGCTGGACAGCTCTGAGGTGGTGACGCTGCTTTGCTCGTCGGAGATGCTGTCGACCAAAGTCGACGAGTGCATGCAGCTGCTCCATGCAACAAATCCCAAGGCCGAGGATCAGGAGCCGCTACACCCGGGCTTCATGCTGGACTCCGCTGGTGTAAACGCCAATTGA |
Protein: MPASEMEAAAASAHAPAGAADQQQEAESAPAPAVQPGSEEAQPAAAAVPALYVGDLHEDVGEDHLFDAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVTALEKLNHSLVLDKPIRVMWSNRDPDARRSGVGNIFVKNLNDFVDNARLQELFSKFGDVLSCKVAKNEDGTTRGYGFVQFASQESADAAIENLHGSLFNDRKLHVATFVKKSERSANNDDKFTNLYMKHLDDDITEELVKLKFSQFGPIVSVKIMRRPDGSSLGFGFVSFQNPESAIKAQETMHGMPIGSKALYVARAQKKEERKQYLQRLHEEKRNEIINKSNESNVYIKNIHDEVDDEALRARFDEFGNITSAKVMRDDKGISRGFGFVCFSTPEEAKGAVSSMRGVMFYGKPLYVAIFQRKEERRAKLQQHFAQLATMVGPANSMIPTGYPHVYFAHPSTHLPQGPPRHGFVYPPMGLSHEWRPNMFPSPPNIPQIHSPMMPNSPRHYRSNRGRMGGNMMPLPHTVHAVNYVAHAPPAKDFMSMPRQRFSHPKYFSNDVMANGLAIHHGDPVLSENDSFSTYLASAPPGEQKKLLGNRLFPLVERHQPRLARKITGMLLELDSSEVVTLLCSSEMLSTKVDECMQLLHATNPKAEDQEPLHPGFMLDSAGVNAN |